We are pleased to announce the release of ChEMBL_10. This latest version of the ChEMBL database contains:
1,118,566 compound records1,000,468 distinct compounds534,391 assays4,668,202 bioactivities8,372 targets40,624 documents6 data sourcesThis release of the ChEMBL database contains a subset of the data from the PubChem BioAssay
database. Specifically, we have included dose-response endpoints (e.g., IC50, Ki, Potency) from confirmatory assays in PubChem
- the aim of this is to integrate data that is comparable to the type and class of data contained within ChEMBL. This subset contains:
333,864 compound records (PubChem Substance entries)794 assays (PubChem BioAssay assays)1,473,189 bioactivities (IC50 etc. measurements)You can access the data via the ChEMBL database interface: http://www.ebi.ac.uk/chembldb/index.php
Changes to the interface include:
'Activity Source Filter' link has been added to the main search bar to allow users to include/exclude activity sources (e.g. PubChem BioAssay, Literature, ...) in the current working session
Links to Wikipedia
are now included in report card pages.
You can download the data from the ChEMBL ftpsite: ftp://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/latest/
All other ChEMBL resources (e.g. Web Services) are also now connected to ChEMBL_10.